Publications | IMP Scientific Papers | Research Institute of Molecular Pathology (IMP)

The IMP publishes 60 to 90 scientific papers in international peer-review journals every year. This evidence for the productivity and high scientific standard of the IMP is listed here in full – a directory of all scientific publications by IMP scientists since the establishment of the institute, organised by years and research groups.

2017

Adams, FF., Heckl, D., Hoffmann, T., Talbot, SR., Kloos, A., Thol, F., Heuser, M., Zuber, J., Schambach, A., Schwarzer, A. (2017) An optimized lentiviral vector system for conditional RNAi and efficient cloning of microRNA embedded short hairpin RNA libraries. Biomaterials. 139:102-115

Alberti, C., Cochella, L. (2017) A framework for understanding the roles of miRNAs in animal development. Development. 144(14):2548-2559

Andergassen, D., Dotter, CP., Wenzel, D., Sigl, V., Bammer, PC., Muckenhuber, M., Mayer, D., Kulinski, TM., Theussl, HC., Penninger, JM., Bock, C., Barlow, DP., Pauler, FM., Hudson, QJ. (2017) Mapping the mouse Allelome reveals tissue-specific regulation of allelic expression. Elife. 6

Arnold, CD., Zabidi, MA., Pagani, M., Rath, M., Schernhuber, K., Kazmar, T., Stark, A. (2017) Genome-wide assessment of sequence-intrinsic enhancer responsiveness at single-base-pair resolution. Nat Biotechnol. 35(2):136-144

Beckham, KS., Ciccarelli, L., Bunduc, CM., Mertens, HD., Ummels, R., Lugmayr, W., Mayr, J., Rettel, M., Savitski, MM., Svergun, DI., Bitter, W., Wilmanns, M., Marlovits, TC., Parret, AH., Houben, EN. (2017) Structure of the mycobacterial ESX-5 type VII secretion system membrane complex by single-particle analysis. Nat Microbiol. 2:17047

Breuss, MW., Hansen, AH., Landler, L., Keays, DA. (2017) Brain-specific knockin of the pathogenic Tubb5 E401K allele causes defects in motor coordination and prepulse inhibition. Behav Brain Res. 323:47-55

Breuss, MW., Leca, I., Gstrein, T., Hansen, AH., Keays, DA. (2017) Tubulins and brain development - The origins of functional specification. Mol Cell Neurosci.

Breuss, MW., Nguyen, T., Srivatsan, A., Leca, I., Tian, G., Fritz, T., Hansen, AH., Musaev, D., McEvoy-Venneri, J., James, KN., Rosti, RO., Scott, E., Tan, U., Kolodner, RD., Cowan, NJ., Keays, DA., Gleeson, JG. (2017) Uner Tan syndrome caused by a homozygous TUBB2B mutation affecting microtubule stability. Hum Mol Genet. 26(2):258-269

Busslinger, GA., Stocsits, RR., van der Lelij, P., Axelsson, E., Tedeschi, A., Galjart, N., Peters, JM. (2017) Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl. Nature. 544(7651):503-507

Doblas, VG., Smakowska-Luzan, E., Fujita, S., Alassimone, J., Barberon, M., Madalinski, M., Belkhadir, Y., Geldner, N. (2017) Root diffusion barrier control by a vasculature-derived peptide binding to the SGN3 receptor. Science. 355(6322):280-284

Elling, U., Wimmer, RA., Leibbrandt, A., Burkard, T., Michlits, G., Leopoldi, A., Micheler, T., Abdeen, D., Zhuk, S., Aspalter, IM., Handl, C., Liebergesell, J., Hubmann, M., Husa, AM., Kinzer, M., Schuller, N., Wetzel, E., van de Loo, N., Martinez, JAZ., Estoppey, D., Riedl, R., Yang, F., Fu, B., Dechat, T., Ivics, Z., Agu, CA., Bell, O., Blaas, D., Gerhardt, H., Hoepfner, D., Stark, A., Penninger, JM. (2017) A reversible haploid mouse embryonic stem cell biobank resource for functional genomics. Nature. 550(7674):114-118

Franz, A., Shlyueva, D., Brunner, E., Stark, A., Basler, K. (2017) Probing the canonicity of the Wnt/Wingless signaling pathway. PLoS Genet. 13(4):e1006700

Freyer, L., Hsu, CW., Nowotschin, S., Pauli, A., Ishida, J., Kuba, K., Fukamizu, A., Schier, AF., Hoodless, PA., Dickinson, ME., Hadjantonakis, AK. (2017) Loss of Apela Peptide in Mice Causes Low Penetrance Embryonic Lethality and Defects in Early Mesodermal Derivatives. Cell Rep. 20(9):2116-2130

Ganglberger, F., Kaczanowska, J., Penninger, JM., Hess, A., Bühler, K., Haubensak, W. (2017) Predicting functional neuroanatomical maps from fusing brain networks with genetic information. Neuroimage.

Greiner, G., Witzeneder, N., Berger, A., Schmetterer, K., Eisenwort, G., Schiefer, AI., Roos, S., Popow-Kraupp, T., Müllauer, L., Zuber, J., Sexl, V., Kenner, L., Sperr, WR., Valent, P., Mayerhofer, M., Hoermann, G. (2017) CCL2 is a KIT D816V-dependent modulator of the bone marrow microenvironment in systemic mastocytosis. Blood. 129(3):371-382

Gu, YF., Cohn, S., Christie, A., McKenzie, T., Wolff, N., Do, QN., Madhuranthakam, AJ., Pedrosa, I., Wang, T., Dey, A., Busslinger, M., Xie, XJ., Hammer, RE., McKay, RM., Kapur, P., Brugarolas, J. (2017) Modeling Renal Cell Carcinoma in Mice: Bap1 and Pbrm1 Inactivation Drive Tumor Grade. Cancer Discov. 7(8):900-917

Hein, N., Cameron, DP., Hannan, KM., Nguyen, NN., Fong, CY., Sornkom, J., Wall, M., Pavy, M., Cullinane, C., Diesch, J., Devlin, JR., George, AJ., Sanij, E., Quin, J., Poortinga, G., Verbrugge, I., Baker, A., Drygin, D., Harrison, SJ., Rozario, JD., Powell, JA., Pitson, SM., Zuber, J., Johnstone, RW., Dawson, MA., Guthridge, MA., Wei, A., McArthur, GA., Pearson, RB., Hannan, RD. (2017) Inhibition of Pol I transcription treats murine and human AML by targeting the leukemia-initiating cell population. Blood. 129(21):2882-2895

Herzog, VA., Reichholf, B., Neumann, T., Rescheneder, P., Bhat, P., Burkard, TR., Wlotzka, W., von Haeseler, A., Zuber, J., Ameres, SL. (2017) Thiol-linked alkylation of RNA to assess expression dynamics. Nat Methods.

Hogg, SJ., Vervoort, SJ., Deswal, S., Ott, CJ., Li, J., Cluse, LA., Beavis, PA., Darcy, PK., Martin, BP., Spencer, A., Traunbauer, AK., Sadovnik, I., Bauer, K., Valent, P., Bradner, JE., Zuber, J., Shortt, J., Johnstone, RW. (2017) BET-Bromodomain Inhibitors Engage the Host Immune System and Regulate Expression of the Immune Checkpoint Ligand PD-L1. Cell Rep. 18(9):2162-2174

Housden, BE., Muhar, M., Gemberling, M., Gersbach, CA., Stainier, DY., Seydoux, G., Mohr, SE., Zuber, J., Perrimon, N. (2017) Loss-of-function genetic tools for animal models: cross-species and cross-platform differences. Nat Rev Genet. 18(1):24-40

Ishihara, K., Ranga, A., Lutolf, MP., Tanaka, EM., Meinhardt, A. (2017) Reconstitution of a Patterned Neural Tube from Single Mouse Embryonic Stem Cells. Methods Mol Biol. 1597:43-55

Jang, H., Levy, S., Flavell, SW., Mende, F., Latham, R., Zimmer, M., Bargmann, CI. (2017) Dissection of neuronal gap junction circuits that regulate social behavior in Caenorhabditis elegans. Proc Natl Acad Sci U S A. 114(7):E1263-E1272

Kreslavsky, T., Vilagos, B., Tagoh, H., Poliakova, DK., Schwickert, TA., Wöhner, M., Jaritz, M., Weiss, S., Taneja, R., Rossner, MJ., Busslinger, M. (2017) Essential role for the transcription factor Bhlhe41 in regulating the development, self-renewal and BCR repertoire of B-1a cells. Nat Immunol. 18(4):442-455

MacPherson, S., Horkoff, M., Gravel, C., Hoffmann, T., Zuber, J., Lum, JJ. (2017) STAT3 Regulation of Citrate Synthase Is Essential during the Initiation of Lymphocyte Cell Growth. Cell Rep. 19(5):910-918

Miller, TE., Liau, BB., Wallace, LC., Morton, AR., Xie, Q., Dixit, D., Factor, DC., Kim, LJY., Morrow, JJ., Wu, Q., Mack, SC., Hubert, CG., Gillespie, SM., Flavahan, WA., Hoffmann, T., Thummalapalli, R., Hemann, MT., Paddison, PJ., Horbinski, CM., Zuber, J., Scacheri, PC., Bernstein, BE., Tesar, PJ., Rich, JN. (2017) Transcription elongation factors represent in vivo cancer dependencies in glioblastoma. Nature. 547(7663):355-359

Nichols, ALA., Eichler, T., Latham, R., Zimmer, M. (2017) A global brain state underlies C. elegans sleep behavior. Science. 356(6344)

Nimpf, S., Keays, DA. (2017) Is magnetogenetics the new optogenetics? EMBO J. 36(12):1643-1646

Nöbauer, T., Skocek, O., Pernía-Andrade, AJ., Weilguny, L., Traub, FM., Molodtsov, MI., Vaziri, A. (2017) Video rate volumetric Ca(2+) imaging across cortex using seeded iterative demixing (SID) microscopy. Nat Methods. 14(8):811-818

Pajenda, S., Mechtler, K., Wagner, L. (2017) Urinary neprilysin in the critically ill patient. BMC Nephrol. 18(1):172

Pavri, R. (2017) R Loops in the Regulation of Antibody Gene Diversification. Genes (Basel). 8(6)

Pelossof, R., Fairchild, L., Huang, CH., Widmer, C., Sreedharan, VT., Sinha, N., Lai, DY., Guan, Y., Premsrirut, PK., Tschaharganeh, DF., Hoffmann, T., Thapar, V., Xiang, Q., Garippa, RJ., Rätsch, G., Zuber, J., Lowe, SW., Leslie, CS., Fellmann, C. (2017) Prediction of potent shRNAs with a sequential classification algorithm. Nat Biotechnol. 35(4):350-353

Reiter, F., Wienerroither, S., Stark, A. (2017) Combinatorial function of transcription factors and cofactors. Curr Opin Genet Dev. 43:73-81

Riley, NM., Hebert, AS., Dürnberger, G., Stanek, F., Mechtler, K., Westphall, MS., Coon, JJ. (2017) Phosphoproteomics with Activated Ion Electron Transfer Dissociation. Anal Chem. 89(12):6367-6376

Russell, JJ., Theriot, JA., Sood, P., Marshall, WF., Landweber, LF., Fritz-Laylin, L., Polka, JK., Oliferenko, S., Gerbich, T., Gladfelter, A., Umen, J., Bezanilla, M., Lancaster, MA., He, S., Gibson, MC., Goldstein, B., Tanaka, EM., Hu, CK., Brunet, A. (2017) Non-model model organisms. BMC Biol. 15(1):55

Samwer, M., Schneider, MWG., Hoefler, R., Schmalhorst, PS., Jude, JG., Zuber, J., Gerlich, DW. (2017) DNA Cross-Bridging Shapes a Single Nucleus from a Set of Mitotic Chromosomes. Cell. 170(5):956-972.e23

Shodhan, A., Kataoka, K., Mochizuki, K., Novatchkova, M., Loidl, J. (2017) A Zip3-like protein plays a role in crossover formation in the SC-less meiosis of the protist Tetrahymena. Mol Biol Cell. 28(6):825-833

Shodhan, A., Novatchkova, M., Loidl, J. (2017) BIME2, a novel gene required for interhomolog meiotic recombination in the protist model organism Tetrahymena. Chromosome Res.

Smeenk, L., Fischer, M., Jurado, S., Jaritz, M., Azaryan, A., Werner, B., Roth, M., Zuber, J., Stanulla, M., den Boer, ML., Mullighan, CG., Strehl, S., Busslinger, M. (2017) Molecular role of the PAX5-ETV6 oncoprotein in promoting B-cell acute lymphoblastic leukemia. EMBO J. 36(6):718-735

Song, M., Sukovich, DJ., Ciccarelli, L., Mayr, J., Fernandez-Rodriguez, J., Mirsky, EA., Tucker, AC., Gordon, DB., Marlovits, TC., Voigt, CA. (2017) Control of type III protein secretion using a minimal genetic system. Nat Commun. 8:14737

Stadlmann, J., Taubenschmid, J., Wenzel, D., Gattinger, A., Dürnberger, G., Dusberger, F., Elling, U., Mach, L., Mechtler, K., Penninger, JM. (2017) Comparative glycoproteomics of stem cells identifies new players in ricin toxicity. Nature. 549(7673):538-542

Stowers, JR., Hofbauer, M., Bastien, R., Griessner, J., Higgins, P., Farooqui, S., Fischer, RM., Nowikovsky, K., Haubensak, W., Couzin, ID., Tessmar-Raible, K., Straw, AD. (2017) Virtual reality for freely moving animals. Nat Methods.

Taubenschmid, J., Stadlmann, J., Jost, M., Klokk, TI., Rillahan, CD., Leibbrandt, A., Mechtler, K., Paulson, JC., Jude, J., Zuber, J., Sandvig, K., Elling, U., Marquardt, T., Thiel, C., Koerner, C., Penninger, JM. (2017) A vital sugar code for ricin toxicity. Cell Res.

Valerio, DG., Xu, H., Chen, CW., Hoshii, T., Eisold, ME., Delaney, C., Cusan, M., Deshpande, AJ., Huang, CH., Lujambio, A., Zheng, YG., Zuber, J., Pandita, TK., Lowe, SW., Armstrong, SA. (2017) Histone Acetyltransferase Activity of MOF Is Required for MLL-AF9 Leukemogenesis. Cancer Res. 77(7):1753-1762

van der Lelij, P., Lieb, S., Jude, J., Wutz, G., Santos, CP., Falkenberg, K., Schlattl, A., Ban, J., Schwentner, R., Hoffmann, T., Kovar, H., Real, FX., Waldman, T., Pearson, MA., Kraut, N., Peters, JM., Zuber, J., Petronczki, M. (2017) Synthetic lethality between the cohesin subunits STAG1 and STAG2 in diverse cancer contexts. Elife. 6

Willems, S., Bouyssié, D., David, M., Locard-Paulet, M., Mechtler, K., Schwämmle, V., Uszkoreit, J., Vaudel, M., Dorfer, V. (2017) Proceedings of the EuBIC Winter School 2017. J Proteomics. 161:78-80

2016

Adams, WC., Chen, YH., Kratchmarov, R., Yen, B., Nish, SA., Lin, WW., Rothman, NJ., Luchsinger, LL., Klein, U., Busslinger, M., Rathmell, JC., Snoeck, HW., Reiner, SL. (2016) Anabolism-Associated Mitochondrial Stasis Driving Lymphocyte Differentiation over Self-Renewal. Cell Rep. 17(12):3142-3152

Ali, AK., Oh, JS., Vivier, E., Busslinger, M., Lee, SH. (2016) NK Cell-Specific Gata3 Ablation Identifies the Maturation Program Required for Bone Marrow Exit and Control of Proliferation. J Immunol. 196(4):1753-67

Asaoka, T., Almagro, J., Ehrhardt, C., Tsai, I., Schleiffer, A., Deszcz, L., Junttila, S., Ringrose, L., Mechtler, K., Kavirayani, A., Gyenesei, A., Hofmann, K., Duchek, P., Rittinger, K., Ikeda, F. (2016) Linear ubiquitination by LUBEL has a role in Drosophila heat stress response. EMBO Rep. 17(11):1624-1640

Baker, A., Gregory, GP., Verbrugge, I., Kats, L., Hilton, JJ., Vidacs, E., Lee, EM., Lock, RB., Zuber, J., Shortt, J., Johnstone, RW. (2016) The CDK9 Inhibitor Dinaciclib Exerts Potent Apoptotic and Antitumor Effects in Preclinical Models of MLL-Rearranged Acute Myeloid Leukemia. Cancer Res. 76(5):1158-69

Bigenzahn, JW., Fauster, A., Rebsamen, M., Kandasamy, RK., Scorzoni, S., Vladimer, GI., Müller, AC., Gstaiger, M., Zuber, J., Bennett, KL., Superti-Furga, G. (2016) An Inducible Retroviral Expression System for Tandem Affinity Purification Mass-Spectrometry-Based Proteomics Identifies Mixed Lineage Kinase Domain-like Protein (MLKL) as an Heat Shock Protein 90 (HSP90) Client. Mol Cell Proteomics. 15(3):1139-50

Breuss, M., Fritz, T., Gstrein, T., Chan, K., Ushakova, L., Yu, N., Vonberg, FW., Werner, B., Elling, U., Keays, DA. (2016) Mutations in the murine homologue of TUBB5 cause microcephaly by perturbing cell cycle progression and inducing p53-associated apoptosis. Development. 143(7):1126-33

Broix, L., Jagline, H., L Ivanova, E., Schmucker, S., Drouot, N., Clayton-Smith, J., Pagnamenta, AT., Metcalfe, KA., Isidor, B., Louvier, UW., Poduri, A., Taylor, JC., Tilly, P., Poirier, K., Saillour, Y., Lebrun, N., Stemmelen, T., Rudolf, G., Muraca, G., Saintpierre, B., Elmorjani, A., Moïse, M., Weirauch, NB., Guerrini, R., Boland, A., Olaso, R., Masson, C., Tripathy, R., Keays, D., Beldjord, C., Nguyen, L., Godin, J., Kini, U., Nischké, P., Deleuze, JF., Bahi-Buisson, N., Sumara, I., Hinckelmann, MV., Chelly, J. (2016) Mutations in the HECT domain of NEDD4L lead to AKT-mTOR pathway deregulation and cause periventricular nodular heterotopia. Nat Genet. 48(11):1349-1358

Brown, NG., VanderLinden, R., Watson, ER., Weissmann, F., Ordureau, A., Wu, KP., Zhang, W., Yu, S., Mercredi, PY., Harrison, JS., Davidson, IF., Qiao, R., Lu, Y., Dube, P., Brunner, MR., Grace, CRR., Miller, DJ., Haselbach, D., Jarvis, MA., Yamaguchi, M., Yanishevski, D., Petzold, G., Sidhu, SS., Kuhlman, B., Kirschner, MW., Harper, JW., Peters, JM., Stark, H., Schulman, BA. (2016) Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. Cell. 165(6):1440-1453

Cabrera-Quio, LE., Herberg, S., Pauli, A. (2016) Decoding sORF translation - from small proteins to gene regulation. RNA Biol. 13(11):1051-1059

Camurdanoglu, BZ., Hrovat, C., Dürnberger, G., Madalinski, M., Mechtler, K., Herbst, R. (2016) Musk Kinase Activity is Modulated By A Serine Phosphorylation Site in The Kinase Loop. Sci Rep. 6:33583

Davidson, IF., Goetz, D., Zaczek, MP., Molodtsov, MI., Huis In 't Veld, PJ., Weissmann, F., Litos, G., Cisneros, DA., Ocampo-Hafalla, M., Ladurner, R., Uhlmann, F., Vaziri, A., Peters, JM. (2016) Rapid movement and transcriptional re-localization of human cohesin on DNA. EMBO J. 35(24):2671-2685

Delconte, RB., Shi, W., Sathe, P., Ushiki, T., Seillet, C., Minnich, M., Kolesnik, TB., Rankin, LC., Mielke, LA., Zhang, JG., Busslinger, M., Smyth, MJ., Hutchinson, DS., Nutt, SL., Nicholson, SE., Alexander, WS., Corcoran, LM., Vivier, E., Belz, GT., Carotta, S., Huntington, ND. (2016) The Helix-Loop-Helix Protein ID2 Governs NK Cell Fate by Tuning Their Sensitivity to Interleukin-15. Immunity. 44(1):103-15

Dietsche, T., Tesfazgi Mebrhatu, M., Brunner, MJ., Abrusci, P., Yan, J., Franz-Wachtel, M., Schärfe, C., Zilkenat, S., Grin, I., Galán, JE., Kohlbacher, O., Lea, S., Macek, B., Marlovits, TC., Robinson, CV., Wagner, S. (2016) Structural and Functional Characterization of the Bacterial Type III Secretion Export Apparatus. PLoS Pathog. 12(12):e1006071

Drexel, T., Mahofsky, K., Latham, R., Zimmer, M., Cochella, L. (2016) Neuron type-specific miRNA represses two broadly expressed genes to modulate an avoidance behavior in C. elegans. Genes Dev. 30(18):2042-2047

Gallego, LD., Ghodgaonkar Steger, M., Polyansky, AA., Schubert, T., Zagrovic, B., Zheng, N., Clausen, T., Herzog, F., Köhler, A. (2016) Structural mechanism for the recognition and ubiquitination of a single nucleosome residue by Rad6-Bre1. Proc Natl Acad Sci U S A. 113(38):10553-8

Ghisi, M., Kats, L., Masson, F., Li, J., Kratina, T., Vidacs, E., Gilan, O., Doyle, MA., Newbold, A., Bolden, JE., Fairfax, KA., de Graaf, CA., Firth, M., Zuber, J., Dickins, RA., Corcoran, LM., Dawson, MA., Belz, GT., Johnstone, RW. (2016) Id2 and E Proteins Orchestrate the Initiation and Maintenance of MLL-Rearranged Acute Myeloid Leukemia. Cancer Cell. 30(1):59-74

Haas, MA., Ngo, L., Li, SS., Schleich, S., Qu, Z., Vanyai, HK., Cullen, HD., Cardona-Alberich, A., Gladwyn-Ng, IE., Pagnamenta, AT., Taylor, JC., Stewart, H., Kini, U., Duncan, KE., Teleman, AA., Keays, DA., Heng, JI. (2016) De Novo Mutations in DENR Disrupt Neuronal Development and Link Congenital Neurological Disorders to Faulty mRNA Translation Re-initiation. Cell Rep. 15(10):2251-65

Hempel, A., Pagnamenta, AT., Blyth, M., Mansour, S., McConnell, V., Kou, I., Ikegawa, S., Tsurusaki, Y., Matsumoto, N., Lo-Castro, A., Plessis, G., Albrecht, B., Battaglia, A., Taylor, JC., Howard, MF., Keays, D., Sohal, AS., Kühl, SJ., Kini, U., McNeill, A. (2016) Deletions and de novo mutations of SOX11 are associated with a neurodevelopmental disorder with features of Coffin-Siris syndrome. J Med Genet. 53(3):152-62

Heuck, A., Schitter-Sollner, S., Suskiewicz, MJ., Kurzbauer, R., Kley, J., Schleiffer, A., Rombaut, P., Herzog, F., Clausen, T. (2016) Structural basis for the disaggregase activity and regulation of Hsp104. Elife. 5

Hons, MT., Huis In 't Veld, PJ., Kaesler, J., Rombaut, P., Schleiffer, A., Herzog, F., Stark, H., Peters, JM. (2016) Topology and structure of an engineered human cohesin complex bound to Pds5B. Nat Commun. 7:12523

Houben, A., Kostanova-Poliakova, D., Weissenböck, M., Graf, J., Teufel, S., von der Mark, K., Hartmann, C. (2016) β-catenin activity in late hypertrophic chondrocytes locally orchestrates osteoblastogenesis and osteoclastogenesis. Development. 143(20):3826-3838

Huis In 't Veld, PJ., Jeganathan, S., Petrovic, A., Singh, P., John, J., Krenn, V., Weissmann, F., Bange, T., Musacchio, A. (2016) Molecular basis of outer kinetochore assembly on CENP-T. Elife. 5

Hums, I., Riedl, J., Mende, F., Kato, S., Kaplan, HS., Latham, R., Sonntag, M., Traunmüller, L., Zimmer, M. (2016) Regulation of two motor patterns enables the gradual adjustment of locomotion strategy in Caenorhabditis elegans. Elife. 5

Isokane, M., Walter, T., Mahen, R., Nijmeijer, B., Hériché, JK., Miura, K., Maffini, S., Ivanov, MP., Kitajima, TS., Peters, JM., Ellenberg, J. (2016) ARHGEF17 is an essential spindle assembly checkpoint factor that targets Mps1 to kinetochores. J Cell Biol. 212(6):647-59

Jarvis, MA., Brown, NG., Watson, ER., VanderLinden, R., Schulman, BA., Peters, JM. (2016) Measuring APC/C-Dependent Ubiquitylation In Vitro. Methods Mol Biol. 1342:287-303

Kaufmann, T., Kukolj, E., Brachner, A., Beltzung, E., Bruno, M., Kostrhon, S., Opravil, S., Hudecz, O., Mechtler, K., Warren, G., Slade, D. (2016) SIRT2 regulates nuclear envelope reassembly through ANKLE2 deacetylation. J Cell Sci. 129(24):4607-4621

Kiermaier, E., Moussion, C., Veldkamp, CT., Gerardy-Schahn, R., de Vries, I., Williams, LG., Chaffee, GR., Phillips, AJ., Freiberger, F., Imre, R., Taleski, D., Payne, RJ., Braun, A., Förster, R., Mechtler, K., Mühlenhoff, M., Volkman, BF., Sixt, M. (2016) Polysialylation controls dendritic cell trafficking by regulating chemokine recognition. Science. 351(6269):186-90

Kim, JS., He, X., Orr, B., Wutz, G., Hill, V., Peters, JM., Compton, DA., Waldman, T. (2016) Intact Cohesion, Anaphase, and Chromosome Segregation in Human Cells Harboring Tumor-Derived Mutations in STAG2. PLoS Genet. 12(2):e1005865

Kollmann, K., Heller, G., Schneckenleithner, C., Warsch, W., Scheicher, R., Ott, RG., Schäfer, M., Fajmann, S., Schlederer, M., Schiefer, AI., Reichart, U., Mayerhofer, M., Hoeller, C., Zöchbauer-Müller, S., Kerjaschki, D., Bock, C., Kenner, L., Hoefler, G., Freissmuth, M., Green, AR., Moriggl, R., Busslinger, M., Malumbres, M., Sexl, V. (2016) A Kinase-Independent Function of CDK6 Links the Cell Cycle to Tumor Angiogenesis. Cancer Cell. 30(2):359-360

Ladurner, R., Kreidl, E., Ivanov, MP., Ekker, H., Idarraga-Amado, MH., Busslinger, GA., Wutz, G., Cisneros, DA., Peters, JM. (2016) Sororin actively maintains sister chromatid cohesion. EMBO J. 35(6):635-53

Lange, L., Pagnamenta, AT., Lise, S., Clasper, S., Stewart, H., Akha, ES., Quaghebeur, G., Knight, SJ., Keays, DA., Taylor, JC., Kini, U. (2016) A de novo frameshift in HNRNPK causing a Kabuki-like syndrome with nodular heterotopia. Clin Genet. 90(3):258-62

Leong, YA., Chen, Y., Ong, HS., Wu, D., Man, K., Deleage, C., Minnich, M., Meckiff, BJ., Wei, Y., Hou, Z., Zotos, D., Fenix, KA., Atnerkar, A., Preston, S., Chipman, JG., Beilman, GJ., Allison, CC., Sun, L., Wang, P., Xu, J., Toe, JG., Lu, HK., Tao, Y., Palendira, U., Dent, AL., Landay, AL., Pellegrini, M., Comerford, I., McColl, SR., Schacker, TW., Long, HM., Estes, JD., Busslinger, M., Belz, GT., Lewin, SR., Kallies, A., Yu, D. (2016) CXCR5(+) follicular cytotoxic T cells control viral infection in B cell follicles. Nat Immunol. 17(10):1187-96

Mackay, LK., Minnich, M., Kragten, NA., Liao, Y., Nota, B., Seillet, C., Zaid, A., Man, K., Preston, S., Freestone, D., Braun, A., Wynne-Jones, E., Behr, FM., Stark, R., Pellicci, DG., Godfrey, DI., Belz, GT., Pellegrini, M., Gebhardt, T., Busslinger, M., Shi, W., Carbone, FR., van Lier, RA., Kallies, A., van Gisbergen, KP. (2016) Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes. Science. 352(6284):459-63

Meshcheryakova, A., Svoboda, M., Tahir, A., Köfeler, HC., Triebl, A., Mungenast, F., Heinze, G., Gerner, C., Zimmermann, P., Jaritz, M., Mechtcheriakova, D. (2016) Exploring the role of sphingolipid machinery during the epithelial to mesenchymal transition program using an integrative approach. Oncotarget. 7(16):22295-323

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Tomanov, K., Zeschmann, A., Hermkes, R., Eifler, K., Ziba, I., Grieco, M., Novatchkova, M., Hofmann, K., Hesse, H., Bachmair, A. (2014) Arabidopsis PIAL1 and 2 promote SUMO chain formation as E4-type SUMO ligases and are involved in stress responses and sulfur metabolism. Plant Cell. 26(11):4547-60

Trentini, DB., Fuhrmann, J., Mechtler, K., Clausen, T. (2014) Chasing Phosphoarginine Proteins: Development of a Selective Enrichment Method Using a Phosphatase Trap. Mol Cell Proteomics. 13(8):1953-64

Valent, P., Zuber, J. (2014) BRD4: a BET(ter) target for the treatment of AML? Cell Cycle. 13(5):689-90

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von Philipsborn, AC., Jörchel, S., Tirian, L., Demir, E., Morita, T., Stern, DL., Dickson, BJ. (2014) Cellular and behavioral functions of fruitless isoforms in Drosophila courtship. Curr Biol. 24(3):242-51

Waidmann, S., Kusenda, B., Mayerhofer, J., Mechtler, K., Jonak, C. (2014) A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Plant Cell. 26(11):4328-44

Walzer, M., Pernas, LE., Nasso, S., Bittremieux, W., Nahnsen, S., Kelchtermans, P., Pichler, P., van den Toorn, HW., Staes, A., Vandenbussche, J., Mazanek, M., Taus, T., Scheltema, RA., Kelstrup, CD., Gatto, L., van Breukelen, B., Aiche, S., Valkenborg, D., Laukens, K., Lilley, KS., Olsen, JV., Heck, AJ., Mechtler, K., Aebersold, R., Gevaert, K., Vizcaíno, JA., Hermjakob, H., Kohlbacher, O., Martens, L. (2014) qcML: an exchange format for quality control metrics from mass spectrometry experiments. Mol Cell Proteomics. 13(8):1905-13

Wang, Q., Oliveira, T., Jankovic, M., Silva, IT., Hakim, O., Yao, K., Gazumyan, A., Mayer, CT., Pavri, R., Casellas, R., Nussenzweig, MC., Robbiani, DF. (2014) Epigenetic targeting of activation-induced cytidine deaminase. Proc Natl Acad Sci U S A. 111(52):18667-72

Wienerroither, S., Rauch, I., Rosebrock, F., Jamieson, AM., Bradner, J., Muhar, M., Zuber, J., Müller, M., Decker, T. (2014) Regulation of NO synthesis, local inflammation, and innate immunity to pathogens by BET family proteins. Mol Cell Biol. 34(3):415-27

Wirnsberger, G., Zwolanek, F., Stadlmann, J., Tortola, L., Liu, SW., Perlot, T., Järvinen, P., Dürnberger, G., Kozieradzki, I., Sarao, R., De Martino, A., Boztug, K., Mechtler, K., Kuchler, K., Klein, C., Elling, U., Penninger, JM. (2014) Jagunal homolog 1 is a critical regulator of neutrophil function in fungal host defense. Nat Genet. 46(9):1028-33

Yáñez-Cuna, JO., Arnold, CD., Stampfel, G., Boryń, LM., Gerlach, D., Rath, M., Stark, A. (2014) Dissection of thousands of cell type-specific enhancers identifies dinucleotide repeat motifs as general enhancer features. Genome Res. 24(7):1147-56

Yapici, N., Zimmer, M., Domingos, AI. (2014) Cellular and molecular basis of decision-making. EMBO Rep. 15(10):1023-35

Yuan, TL., Fellmann, C., Lee, CS., Ritchie, CD., Thapar, V., Lee, LC., Hsu, DJ., Grace, D., Carver, JO., Zuber, J., Luo, J., McCormick, F., Lowe, SW. (2014) Development of siRNA payloads to target KRAS-mutant cancer. Cancer Discov. 4(10):1182-97

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2013

Arnold, CD., Gerlach, D., Stelzer, C., Boryń, ŁM., Rath, M., Stark, A. (2013) Genome-wide quantitative enhancer activity maps identified by STARR-seq. Science. 339(6123):1074-7

Aschauer, DF., Kreuz, S., Rumpel, S. (2013) Analysis of transduction efficiency, tropism and axonal transport of AAV serotypes 1, 2, 5, 6, 8 and 9 in the mouse brain. PLoS One. 8(9):e76310

Bardet, AF., Steinmann, J., Bafna, S., Knoblich, JA., Zeitlinger, J., Stark, A. (2013) Identification of transcription factor binding sites from ChIP-seq data at high resolution. Bioinformatics. 29(21):2705-13

Bathellier, B., Tee, SP., Hrovat, C., Rumpel, S. (2013) A multiplicative reinforcement learning model capturing learning dynamics and interindividual variability in mice. Proc Natl Acad Sci U S A. 110(49):19950-5

Cabral, G., Sans, SS., Cowan, CR., Dammermann, A. (2013) Multiple mechanisms contribute to centriole separation in C. elegans. Curr Biol. 23(14):1380-7

Censi, A., Straw, AD., Sayaman, RW., Murray, RM., Dickinson, MH. (2013) Discriminating external and internal causes for heading changes in freely flying Drosophila. PLoS Comput Biol. 9(2):e1002891

Conti, V., Carabalona, A., Pallesi-Pocachard, E., Parrini, E., Leventer, RJ., Buhler, E., McGillivray, G., Michel, FJ., Striano, P., Mei, D., Watrin, F., Lise, S., Pagnamenta, AT., Taylor, JC., Kini, U., Clayton-Smith, J., Novara, F., Zuffardi, O., Dobyns, WB., Scheffer, IE., Robertson, SP., Berkovic, SF., Represa, A., Keays, DA., Cardoso, C., Guerrini, R. (2013) Periventricular heterotopia in 6q terminal deletion syndrome: role of the C6orf70 gene. Brain. 136(Pt 11):3378-94

Earnshaw, WC., Allshire, RC., Black, BE., Bloom, K., Brinkley, BR., Brown, W., Cheeseman, IM., Choo, KH., Copenhaver, GP., Deluca, JG., Desai, A., Diekmann, S., Erhardt, S., Fitzgerald-Hayes, M., Foltz, D., Fukagawa, T., Gassmann, R., Gerlich, DW., Glover, DM., Gorbsky, GJ., Harrison, SC., Heun, P., Hirota, T., Jansen, LE., Karpen, G., Kops, GJ., Lampson, MA., Lens, SM., Losada, A., Luger, K., Maiato, H., Maddox, PS., Margolis, RL., Masumoto, H., McAinsh, AD., Mellone, BG., Meraldi, P., Musacchio, A., Oegema, K., O'Neill, RJ., Salmon, ED., Scott, KC., Straight, AF., Stukenberg, PT., Sullivan, BA., Sullivan, KF., Sunkel, CE., Swedlow, JR., Walczak, CE., Warburton, PE., Westermann, S., Willard, HF., Wordeman, L., Yanagida, M., Yen, TJ., Yoda, K., Cleveland, DW. (2013) Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Res. 21(2):101-6

Ebert, A., Medvedovic, J., Tagoh, H., Schwickert, TA., Busslinger, M. (2013) Control of antigen receptor diversity through spatial regulation of V(D)J recombination. Cold Spring Harb Symp Quant Biol. 78:11-21

Elsayad, K., Urich, A., Tan, PS., Nemethova, M., Small, JV., Unterrainer, K., Heinze, KG. (2013) Spectrally coded optical nanosectioning (SpecON) with biocompatible metal-dielectric-coated substrates. Proc Natl Acad Sci U S A. 110(50):20069-74

Esteghamat, F., Gillemans, N., Bilic, I., van den Akker, E., Cantù, I., van Gent, T., Klingmüller, U., van Lom, K., von Lindern, M., Grosveld, F., Bryn van Dijk, T., Busslinger, M., Philipsen, S. (2013) Erythropoiesis and globin switching in compound Klf1::Bcl11a mutant mice. Blood. 121(13):2553-62

Fellmann, C., Hoffmann, T., Sridhar, V., Hopfgartner, B., Muhar, M., Roth, M., Lai, DY., Barbosa, IA., Kwon, JS., Guan, Y., Sinha, N., Zuber, J. (2013) An optimized microRNA backbone for effective single-copy RNAi. Cell Rep. 5(6):1704-13

Fischer, RM., Fontinha, BM., Kirchmaier, S., Steger, J., Bloch, S., Inoue, D., Panda, S., Rumpel, S., Tessmar-Raible, K. (2013) Co-expression of VAL- and TMT-opsins uncovers ancient photosensory interneurons and motorneurons in the vertebrate brain. PLoS Biol. 11(6):e1001585

Frelin, C., Herrington, R., Janmohamed, S., Barbara, M., Tran, G., Paige, CJ., Benveniste, P., Zuñiga-Pflücker, JC., Souabni, A., Busslinger, M., Iscove, NN. (2013) GATA-3 regulates the self-renewal of long-term hematopoietic stem cells. Nat Immunol. 14(10):1037-44

Frese, CK., Zhou, H., Taus, T., Altelaar, AF., Mechtler, K., Heck, AJ., Mohammed, S. (2013) Unambiguous phosphosite localization using electron-transfer/higher-energy collision dissociation (EThcD). J Proteome Res. 12(3):1520-5

Frye, JJ., Brown, NG., Petzold, G., Watson, ER., Grace, CR., Nourse, A., Jarvis, MA., Kriwacki, RW., Peters, JM., Stark, H., Schulman, BA. (2013) Electron microscopy structure of human APC/C(CDH1)-EMI1 reveals multimodal mechanism of E3 ligase shutdown. Nat Struct Mol Biol. 20(7):827-35

Fuhrmann, J., Mierzwa, B., Trentini, DB., Spiess, S., Lehner, A., Charpentier, E., Clausen, T. (2013) Structural basis for recognizing phosphoarginine and evolving residue-specific protein phosphatases in gram-positive bacteria. Cell Rep. 3(6):1832-9

Gazda, L., Pokrzywa, W., Hellerschmied, D., Löwe, T., Forné, I., Mueller-Planitz, F., Hoppe, T., Clausen, T. (2013) The myosin chaperone UNC-45 is organized in tandem modules to support myofilament formation in C. elegans. Cell. 152(1-2):183-95

Gramstrup Petersen, J., Rojo Romanos, T., Juozaityte, V., Redo Riveiro, A., Hums, I., Traunmüller, L., Zimmer, M., Pocock, R. (2013) EGL-13/SoxD specifies distinct O2 and CO2 sensory neuron fates in Caenorhabditis elegans. PLoS Genet. 9(5):e1003511

Hanada, T., Weitzer, S., Mair, B., Bernreuther, C., Wainger, BJ., Ichida, J., Hanada, R., Orthofer, M., Cronin, SJ., Komnenovic, V., Minis, A., Sato, F., Mimata, H., Yoshimura, A., Tamir, I., Rainer, J., Kofler, R., Yaron, A., Eggan, KC., Woolf, CJ., Glatzel, M., Herbst, R., Martinez, J., Penninger, JM. (2013) CLP1 links tRNA metabolism to progressive motor-neuron loss. Nature. 495(7442):474-80

Hwang, SS., Kim, YU., Lee, S., Jang, SW., Kim, MK., Koh, BH., Lee, W., Kim, J., Souabni, A., Busslinger, M., Lee, GR. (2013) Transcription factor YY1 is essential for regulation of the Th2 cytokine locus and for Th2 cell differentiation. Proc Natl Acad Sci U S A. 110(1):276-81

Ivanov, AR., Colangelo, CM., Dufresne, CP., Friedman, DB., Lilley, KS., Mechtler, K., Phinney, BS., Rose, KL., Rudnick, PA., Searle, BC., Shaffer, SA., Weintraub, ST. (2013) Interlaboratory studies and initiatives developing standards for proteomics. Proteomics. 13(6):904-9

Jászai, J., Graupner, S., Tanaka, EM., Funk, RH., Huttner, WB., Brand, M., Corbeil, D. (2013) Spatial distribution of prominin-1 (CD133)-positive cells within germinative zones of the vertebrate brain. PLoS One. 8(5):e63457

Jüschke, C., Dohnal, I., Pichler, P., Harzer, H., Swart, R., Ammerer, G., Mechtler, K., Knoblich, JA. (2013) Transcriptome and proteome quantification of a tumor model provides novel insights into post-transcriptional gene regulation. Genome Biol. 14(11):r133

Kazmar, T., Kvon EZ., Stark, A., Lampert, CH.. (2013) Drosophila Embryo Stage Annotation using Label Propagation International Conference on Computer Vision (ICCV). Springer. Dec:1089–1096

Khattak, S., Sandoval-Guzmán, T., Stanke, N., Protze, S., Tanaka, EM., Lindemann, D. (2013) Foamy virus for efficient gene transfer in regeneration studies. BMC Dev Biol. 13:17

Knapp, D., Schulz, H., Rascon, CA., Volkmer, M., Scholz, J., Nacu, E., Le, M., Novozhilov, S., Tazaki, A., Protze, S., Jacob, T., Hubner, N., Habermann, B., Tanaka, EM. (2013) Comparative transcriptional profiling of the axolotl limb identifies a tripartite regeneration-specific gene program. PLoS One. 8(5):e61352

Kollmann, K., Heller, G., Schneckenleithner, C., Warsch, W., Scheicher, R., Ott, RG., Schäfer, M., Fajmann, S., Schlederer, M., Schiefer, AI., Reichart, U., Mayerhofer, M., Hoeller, C., Zöchbauer-Müller, S., Kerjaschki, D., Bock, C., Kenner, L., Hoefler, G., Freissmuth, M., Green, AR., Moriggl, R., Busslinger, M., Malumbres, M., Sexl, V. (2013) A kinase-independent function of CDK6 links the cell cycle to tumor angiogenesis. Cancer Cell. 24(2):167-81

Kragl, M., Roensch, K., Nüsslein, I., Tazaki, A., Taniguchi, Y., Tarui, H., Hayashi, T., Agata, K., Tanaka, EM. (2013) Muscle and connective tissue progenitor populations show distinct Twist1 and Twist3 expression profiles during axolotl limb regeneration. Dev Biol. 373(1):196-204

Lampert, F., Mieck, C., Alushin, GM., Nogales, E., Westermann, S. (2013) Molecular requirements for the formation of a kinetochore-microtubule interface by Dam1 and Ndc80 complexes. J Cell Biol. 200(1):21-30

Lauwers, M., Pichler, P., Edelman, NB., Resch, GP., Ushakova, L., Salzer, MC., Heyers, D., Saunders, M., Shaw, J., Keays, DA. (2013) An iron-rich organelle in the cuticular plate of avian hair cells. Curr Biol. 23(10):924-9

Lin, CY., Chuang, CC., Hua, TE., Chen, CC., Dickson, BJ., Greenspan, RJ., Chiang, AS. (2013) A comprehensive wiring diagram of the protocerebral bridge for visual information processing in the Drosophila brain. Cell Rep. 3(5):1739-53

Lin, HH., Chu, LA., Fu, TF., Dickson, BJ., Chiang, AS. (2013) Parallel neural pathways mediate CO2 avoidance responses in Drosophila. Science. 340(6138):1338-41

Mair, B., Popow, J., Mechtler, K., Weitzer, S., Martinez, J. (2013) Intron excision from precursor tRNA molecules in mammalian cells requires ATP hydrolysis and phosphorylation of tRNA-splicing endonuclease components. Biochem Soc Trans. 41(4):831-7

Maisak, MS., Haag, J., Ammer, G., Serbe, E., Meier, M., Leonhardt, A., Schilling, T., Bahl, A., Rubin, GM., Nern, A., Dickson, BJ., Reiff, DF., Hopp, E., Borst, A. (2013) A directional tuning map of Drosophila elementary motion detectors. Nature. 500(7461):212-6

Malvezzi, F., Litos, G., Schleiffer, A., Heuck, A., Mechtler, K., Clausen, T., Westermann, S. (2013) A structural basis for kinetochore recruitment of the Ndc80 complex via two distinct centromere receptors. EMBO J. 32(3):409-23

Masson, F., Minnich, M., Olshansky, M., Bilic, I., Mount, AM., Kallies, A., Speed, TP., Busslinger, M., Nutt, SL., Belz, GT. (2013) Id2-mediated inhibition of E2A represses memory CD8+ T cell differentiation. J Immunol. 190(9):4585-94

Mastny, M., Heuck, A., Kurzbauer, R., Heiduk, A., Boisguerin, P., Volkmer, R., Ehrmann, M., Rodrigues, CD., Rudner, DZ., Clausen, T. (2013) CtpB assembles a gated protease tunnel regulating cell-cell signaling during spore formation in Bacillus subtilis. Cell. 155(3):647-58

Medvedovic, J., Ebert, A., Tagoh, H., Tamir, IM., Schwickert, TA., Novatchkova, M., Sun, Q., Huis In 't Veld, PJ., Guo, C., Yoon, HS., Denizot, Y., Holwerda, SJ., de Laat, W., Cogné, M., Shi, Y., Alt, FW., Busslinger, M. (2013) Flexible long-range loops in the VH gene region of the Igh locus facilitate the generation of a diverse antibody repertoire. Immunity. 39(2):229-44

Moczulska, KE., Tinter-Thiede, J., Peter, M., Ushakova, L., Wernle, T., Bathellier, B., Rumpel, S. (2013) Dynamics of dendritic spines in the mouse auditory cortex during memory formation and memory recall. Proc Natl Acad Sci U S A. 110(45):18315-20

Moruz, L., Pichler, P., Stranzl, T., Mechtler, K., Käll, L. (2013) Optimized nonlinear gradients for reversed-phase liquid chromatography in shotgun proteomics. Anal Chem. 85(16):7777-85

Nacu, E., Glausch, M., Le, HQ., Damanik, FF., Schuez, M., Knapp, D., Khattak, S., Richter, T., Tanaka, EM. (2013) Connective tissue cells, but not muscle cells, are involved in establishing the proximo-distal outcome of limb regeneration in the axolotl. Development. 140(3):513-8

Nishiyama, T., Sykora, MM., Huis in 't Veld, PJ., Mechtler, K., Peters, JM. (2013) Aurora B and Cdk1 mediate Wapl activation and release of acetylated cohesin from chromosomes by phosphorylating Sororin. Proc Natl Acad Sci U S A. 110(33):13404-9

Ohtsuka, N., Badurek, S., Busslinger, M., Benes, FM., Minichiello, L., Rudolph, U. (2013) GABAergic neurons regulate lateral ventricular development via transcription factor Pax5. Genesis. 51(4):234-45

Osman, K., Roitinger, E., Yang, J., Armstrong, S., Mechtler, K., Franklin, FC. (2013) Analysis of meiotic protein complexes from Arabidopsis and Brassica using affinity-based proteomics. Methods Mol Biol. 990:215-26

Peter, M., Bathellier, B., Fontinha, B., Pliota, P., Haubensak, W., Rumpel, S. (2013) Transgenic mouse models enabling photolabeling of individual neurons in vivo. PLoS One. 8(4):e62132

Reiter, W., Klopf, E., De Wever, V., Anrather, D., Petryshyn, A., Roetzer, A., Niederacher, G., Roitinger, E., Dohnal, I., Görner, W., Mechtler, K., Brocard, C., Schüller, C., Ammerer, G. (2013) Yeast protein phosphatase 2A-Cdc55 regulates the transcriptional response to hyperosmolarity stress by regulating Msn2 and Msn4 chromatin recruitment. Mol Cell Biol. 33(5):1057-72

Roensch, K., Tazaki, A., Chara, O., Tanaka, EM. (2013) Progressive specification rather than intercalation of segments during limb regeneration. Science. 342(6164):1375-9

Schmidt, A., Ammerer, G., Mechtler, K. (2013) Studying the fragmentation behavior of peptides with arginine phosphorylation and its influence on phospho-site localization. Proteomics. 13(6):945-54

Schrödel, T., Prevedel, R., Aumayr, K., Zimmer, M., Vaziri, A. (2013) Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light. Nat Methods. 10(10):1013-20

Shi, J., Wang, E., Zuber, J., Rappaport, A., Taylor, M., Johns, C., Lowe, SW., Vakoc, CR. (2013) The Polycomb complex PRC2 supports aberrant self-renewal in a mouse model of MLL-AF9;Nras(G12D) acute myeloid leukemia. Oncogene. 32(7):930-8

Shi, J., Whyte, WA., Zepeda-Mendoza, CJ., Milazzo, JP., Shen, C., Roe, JS., Minder, JL., Mercan, F., Wang, E., Eckersley-Maslin, MA., Campbell, AE., Kawaoka, S., Shareef, S., Zhu, Z., Kendall, J., Muhar, M., Haslinger, C., Yu, M., Roeder, RG., Wigler, MH., Blobel, GA., Zuber, J., Spector, DL., Young, RA., Vakoc, CR. (2013) Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation. Genes Dev. 27(24):2648-62

Simon, A., Tanaka, EM. (2013) Limb regeneration. Wiley Interdiscip Rev Dev Biol. 2(2):291-300

Simunovic, M., Mim, C., Marlovits, TC., Resch, G., Unger, VM., Voth, GA. (2013) Protein-mediated transformation of lipid vesicles into tubular networks. Biophys J. 105(3):711-9

Skora, S., Zimmer, M. (2013) Life(span) in balance: oxygen fuels a sophisticated neural network for lifespan homeostasis in C. elegans. EMBO J. 32(11):1499-501

Stark, A. (2013) Regulatory Genomics - Decoding Drosophila Regulatory Sequences. Biomed Tech (Berl).

Stewart, R., Rascón, CA., Tian, S., Nie, J., Barry, C., Chu, LF., Ardalani, H., Wagner, RJ., Probasco, MD., Bolin, JM., Leng, N., Sengupta, S., Volkmer, M., Habermann, B., Tanaka, EM., Thomson, JA., Dewey, CN. (2013) Comparative RNA-seq analysis in the unsequenced axolotl: the oncogene burst highlights early gene expression in the blastema. PLoS Comput Biol. 9(3):e1002936

Tedeschi, A., Wutz, G., Huet, S., Jaritz, M., Wuensche, A., Schirghuber, E., Davidson, IF., Tang, W., Cisneros, DA., Bhaskara, V., Nishiyama, T., Vaziri, A., Wutz, A., Ellenberg, J., Peters, JM. (2013) Wapl is an essential regulator of chromatin structure and chromosome segregation. Nature. 501(7468):564-8

Treiber, CD., Salzer, M., Breuss, M., Ushakova, L., Lauwers, M., Edelman, N., Keays, DA. (2013) High resolution anatomical mapping confirms the absence of a magnetic sense system in the rostral upper beak of pigeons. Commun Integr Biol. 6(4):e24859

Watkins-Chow, DE., Cooke, J., Pidsley, R., Edwards, A., Slotkin, R., Leeds, KE., Mullen, R., Baxter, LL., Campbell, TG., Salzer, MC., Biondini, L., Gibney, G., Phan Dinh Tuy, F., Chelly, J., Morris, HD., Riegler, J., Lythgoe, MF., Arkell, RM., Loreni, F., Flint, J., Pavan, WJ., Keays, DA. (2013) Mutation of the diamond-blackfan anemia gene Rps7 in mouse results in morphological and neuroanatomical phenotypes. PLoS Genet. 9(1):e1003094

Westermann, S., Schleiffer, A. (2013) Family matters: structural and functional conservation of centromere-associated proteins from yeast to humans. Trends Cell Biol. 23(6):260-9

Yáñez-Cuna, JO., Kvon, EZ., Stark, A. (2013) Deciphering the transcriptional cis-regulatory code. Trends Genet. 29(1):11-22

Zantke, J., Ishikawa-Fujiwara, T., Arboleda, E., Lohs, C., Schipany, K., Hallay, N., Straw, AD., Todo, T., Tessmar-Raible, K. (2013) Circadian and circalunar clock interactions in a marine annelid. Cell Rep. 5(1):99-113

Zhu, Y., Carido, M., Meinhardt, A., Kurth, T., Karl, MO., Ader, M., Tanaka, EM. (2013) Three-dimensional neuroepithelial culture from human embryonic stem cells and its use for quantitative conversion to retinal pigment epithelium. PLoS One. 8(1):e54552

2012

Bathellier, B., Ushakova, L., Rumpel, S. (2012) Discrete neocortical dynamics predict behavioral categorization of sounds. Neuron. 76(2):435-49

Berger, C., Harzer, H., Burkard, TR., Steinmann, J., van der Horst, S., Laurenson, AS., Novatchkova, M., Reichert, H., Knoblich, JA. (2012) FACS purification and transcriptome analysis of drosophila neural stem cells reveals a role for Klumpfuss in self-renewal. Cell Rep. 2(2):407-18

Bergerson, RJ., Collier, LS., Sarver, AL., Been, RA., Lugthart, S., Diers, MD., Zuber, J., Rappaport, AR., Nixon, MJ., Silverstein, KA., Fan, D., Lamblin, AF., Wolff, L., Kersey, JH., Delwel, R., Lowe, SW., O'Sullivan, MG., Kogan, SC., Adams, DJ., Largaespada, DA. (2012) An insertional mutagenesis screen identifies genes that cooperate with Mll-AF9 in a murine leukemogenesis model. Blood. 119(19):4512-23

Bienkowska, D., Cowan, CR. (2012) Centrosomes can initiate a polarity axis from any position within one-cell C. elegans embryos. Curr Biol. 22(7):583-9

Bossinger, O., Cowan, CR. (2012) Methods in cell biology: analysis of cell polarity in C. elegans embryos. Methods Cell Biol. 107:207-38

Breuss, M., Heng, JI., Poirier, K., Tian, G., Jaglin, XH., Qu, Z., Braun, A., Gstrein, T., Ngo, L., Haas, M., Bahi-Buisson, N., Moutard, ML., Passemard, S., Verloes, A., Gressens, P., Xie, Y., Robson, KJ., Rani, DS., Thangaraj, K., Clausen, T., Chelly, J., Cowan, NJ., Keays, DA. (2012) Mutations in the β-tubulin gene TUBB5 cause microcephaly with structural brain abnormalities. Cell Rep. 2(6):1554-62

Chelysheva, L., Vezon, D., Chambon, A., Gendrot, G., Pereira, L., Lemhemdi, A., Vrielynck, N., Le Guin, S., Novatchkova, M., Grelon, M. (2012) The Arabidopsis HEI10 is a new ZMM protein related to Zip3. PLoS Genet. 8(7):e1002799

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Hornung, P., Maier, M., Alushin, GM., Lander, GC., Nogales, E., Westermann, S. (2011) Molecular architecture and connectivity of the budding yeast Mtw1 kinetochore complex. J Mol Biol. 405(2):548-59

Huang, R., Jaritz, M., Guenzl, P., Vlatkovic, I., Sommer, A., Tamir, IM., Marks, H., Klampfl, T., Kralovics, R., Stunnenberg, HG., Barlow, DP., Pauler, FM. (2011) An RNA-Seq strategy to detect the complete coding and non-coding transcriptome including full-length imprinted macro ncRNAs. PLoS One. 6(11):e27288

Jászai, J., Fargeas, CA., Graupner, S., Tanaka, EM., Brand, M., Huttner, WB., Corbeil, D. (2011) Distinct and conserved prominin-1/CD133-positive retinal cell populations identified across species. PLoS One. 6(3):e17590

Khan, AG., Pickl-Herk, A., Gajdzik, L., Marlovits, TC., Fuchs, R., Blaas, D. (2011) Entry of a heparan sulphate-binding HRV8 variant strictly depends on dynamin but not on clathrin, caveolin, and flotillin. Virology. 412(1):55-67

Kley, J., Schmidt, B., Boyanov, B., Stolt-Bergner, PC., Kirk, R., Ehrmann, M., Knopf, RR., Naveh, L., Adam, Z., Clausen, T. (2011) Structural adaptation of the plant protease Deg1 to repair photosystem II during light exposure. Nat Struct Mol Biol. 18(6):728-31

Köcher, T. (2011) Comment on 'Jobs for the boys'. EMBO Rep. 12(6):488

Köcher, T., Pichler, P., Mazanek, M., Swart, R., Mechtler, K. (2011) Altered Mascot search results by changing the m/z range of MS/MS spectra: analysis and potential applications. Anal Bioanal Chem. 400(8):2339-47

Köcher, T., Pichler, P., Swart, R., Mechtler, K. (2011) Quality control in LC-MS/MS. Proteomics. 11(6):1026-30

Köcher, T., Swart, R., Mechtler, K. (2011) Ultra-high-pressure RPLC hyphenated to an LTQ-Orbitrap Velos reveals a linear relation between peak capacity and number of identified peptides. Anal Chem. 83(7):2699-704

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Lampert, F., Westermann, S. (2011) A blueprint for kinetochores - new insights into the molecular mechanics of cell division. Nat Rev Mol Cell Biol. 12(7):407-12

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Loewenstein, Y., Kuras, A., Rumpel, S. (2011) Multiplicative dynamics underlie the emergence of the log-normal distribution of spine sizes in the neocortex in vivo. J Neurosci. 31(26):9481-8

Lyashenko, N., Winter, M., Migliorini, D., Biechele, T., Moon, RT., Hartmann, C. (2011) Differential requirement for the dual functions of β-catenin in embryonic stem cell self-renewal and germ layer formation. Nat Cell Biol. 13(7):753-61

Malle, E., Zhou, H., Neuhold, J., Spitzenberger, B., Klepsch, F., Pollak, T., Bergner, O., Ecker, GF., Stolt-Bergner, PC. (2011) Random mutagenesis of the prokaryotic peptide transporter YdgR identifies potential periplasmic gating residues. J Biol Chem. 286(26):23121-31

McManus, S., Ebert, A., Salvagiotto, G., Medvedovic, J., Sun, Q., Tamir, I., Jaritz, M., Tagoh, H., Busslinger, M. (2011) The transcription factor Pax5 regulates its target genes by recruiting chromatin-modifying proteins in committed B cells. EMBO J. 30(12):2388-404

Mechtcheriakova, D., Sobanov, Y., Holtappels, G., Bajna, E., Svoboda, M., Jaritz, M., Bachert, C., Jensen-Jarolim, E. (2011) Activation-induced cytidine deaminase (AID)-associated multigene signature to assess impact of AID in etiology of diseases with inflammatory component. PLoS One. 6(10):e25611

Medvedovic, J., Ebert, A., Tagoh, H., Busslinger, M. (2011) Pax5: a master regulator of B cell development and leukemogenesis. Adv Immunol. 111:179-206

Merdanovic, M., Clausen, T., Kaiser, M., Huber, R., Ehrmann, M. (2011) Protein quality control in the bacterial periplasm. Annu Rev Microbiol. 65:149-68

Nacu, E., Tanaka, EM. (2011) Limb regeneration: a new development? Annu Rev Cell Dev Biol. 27:409-40

Neumüller, RA., Richter, C., Fischer, A., Novatchkova, M., Neumüller, KG., Knoblich, JA. (2011) Genome-wide analysis of self-renewal in Drosophila neural stem cells by transgenic RNAi. Cell Stem Cell. 8(5):580-93

Ng, K., Daigle, N., Bancaud, A., Ohhata, T., Humphreys, P., Walker, R., Ellenberg, J., Wutz, A. (2011) A system for imaging the regulatory noncoding Xist RNA in living mouse embryonic stem cells. Mol Biol Cell. 22(14):2634-45

Pappu, KS., Morey, M., Nern, A., Spitzweck, B., Dickson, BJ., Zipursky, SL. (2011) Robo-3--mediated repulsive interactions guide R8 axons during Drosophila visual system development. Proc Natl Acad Sci U S A. 108(18):7571-6

Pichler, P., Köcher, T., Holzmann, J., Möhring, T., Ammerer, G., Mechtler, K. (2011) Improved precision of iTRAQ and TMT quantification by an axial extraction field in an Orbitrap HCD cell. Anal Chem. 83(4):1469-74

Popow, J., Englert, M., Weitzer, S., Schleiffer, A., Mierzwa, B., Mechtler, K., Trowitzsch, S., Will, CL., Lührmann, R., Söll, D., Martinez, J. (2011) HSPC117 is the essential subunit of a human tRNA splicing ligase complex. Science. 331(6018):760-4

Qin, H., Suzuki, K., Nakata, M., Chikuma, S., Izumi, N., Huong, le T., Maruya, M., Fagarasan, S., Busslinger, M., Honjo, T., Nagaoka, H. (2011) Activation-induced cytidine deaminase expression in CD4+ T cells is associated with a unique IL-10-producing subset that increases with age. PLoS One. 6(12):e29141

Resch, GP., Brandstetter, M., Pickl-Herk, AM., Königsmaier, L., Wonesch, VI., Urban, E. (2011) Immersion freezing of biological specimens: rationale, principles, and instrumentation. Cold Spring Harb Protoc. 2011(7):778-82

Sampaio, JL., Gerl, MJ., Klose, C., Ejsing, CS., Beug, H., Simons, K., Shevchenko, A. (2011) Membrane lipidome of an epithelial cell line. Proc Natl Acad Sci U S A. 108(5):1903-7

Sawa, J., Malet, H., Krojer, T., Canellas, F., Ehrmann, M., Clausen, T. (2011) Molecular adaptation of the DegQ protease to exert protein quality control in the bacterial cell envelope. J Biol Chem. 286(35):30680-90

Schönbauer, C., Distler, J., Jährling, N., Radolf, M., Dodt, HU., Frasch, M., Schnorrer, F. (2011) Spalt mediates an evolutionarily conserved switch to fibrillar muscle fate in insects. Nature. 479(7373):406-9

Schraidt, O., Marlovits, TC. (2011) Three-dimensional model of Salmonella's needle complex at subnanometer resolution. Science. 331(6021):1192-5

Stöger-Pollach, M., Treiber, CD., Resch, GP., Keays, DA., Ennen, I. (2011) EMCD real space maps of Magnetospirillum magnetotacticum. Micron. 42(5):456-60

Takada, Y., Gresh, L., Bozec, A., Ikeda, E., Kamiya, K., Watanabe, M., Kobayashi, K., Asano, K., Toyama, Y., Wagner, EF., Matsuo, K. (2011) Interstitial lung disease induced by gefitinib and toll-like receptor ligands is mediated by Fra-1. Oncogene. 30(36):3821-32

Tanaka, EM., Reddien, PW. (2011) The cellular basis for animal regeneration. Dev Cell. 21(1):172-85

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Truebestein, L., Tennstaedt, A., Mönig, T., Krojer, T., Canellas, F., Kaiser, M., Clausen, T., Ehrmann, M. (2011) Substrate-induced remodeling of the active site regulates human HTRA1 activity. Nat Struct Mol Biol. 18(3):386-8

von Philipsborn, AC., Liu, T., Yu, JY., Masser, C., Bidaye, SS., Dickson, BJ. (2011) Neuronal control of Drosophila courtship song. Neuron. 69(3):509-22

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2010

Agrelo, R., Wutz, A. (2010) ConteXt of change--X inactivation and disease. EMBO Mol Med. 2(1):6-15

Agrelo, R., Wutz, A. (2010) X inactivation and disease. Semin Cell Dev Biol. 21(2):194-200

Alpert, AJ., Petritis, K., Kangas, L., Smith, RD., Mechtler, K., Mitulović, G., Mohammed, S., Heck, AJ. (2010) Peptide orientation affects selectivity in ion-exchange chromatography. Anal Chem. 82(12):5253-9

Antos, CL., Tanaka, EM. (2010) Vertebrates that regenerate as models for guiding stem cels. Adv Exp Med Biol. 695:184-214

Baudrimont, A., Penkner, A., Woglar, A., Machacek, T., Wegrostek, C., Gloggnitzer, J., Fridkin, A., Klein, F., Gruenbaum, Y., Pasierbek, P., Jantsch, V. (2010) Leptotene/zygotene chromosome movement via the SUN/KASH protein bridge in Caenorhabditis elegans. PLoS Genet. 6(11):e1001219

Baumann, CL., Aspalter, IM., Sharif, O., Pichlmair, A., Blüml, S., Grebien, F., Bruckner, M., Pasierbek, P., Aumayr, K., Planyavsky, M., Bennett, KL., Colinge, J., Knapp, S., Superti-Furga, G. (2010) CD14 is a coreceptor of Toll-like receptors 7 and 9. J Exp Med. 207(12):2689-701

Berg, DA., Kirkham, M., Beljajeva, A., Knapp, D., Habermann, B., Ryge, J., Tanaka, EM., Simon, A. (2010) Efficient regeneration by activation of neurogenesis in homeostatically quiescent regions of the adult vertebrate brain. Development. 137(24):4127-34

Bouchard, M., de Caprona, D., Busslinger, M., Xu, P., Fritzsch, B. (2010) Pax2 and Pax8 cooperate in mouse inner ear morphogenesis and innervation. BMC Dev Biol. 10:89

Braglia, P., Heindl, K., Schleiffer, A., Martinez, J., Proudfoot, NJ. (2010) Role of the RNA/DNA kinase Grc3 in transcription termination by RNA polymerase I. EMBO Rep. 11(10):758-64

Braun, A., Breuss, M., Salzer, MC., Flint, J., Cowan, NJ., Keays, DA. (2010) Tuba8 is expressed at low levels in the developing mouse and human brain. Am J Hum Genet. 86(5):819-22; author reply 822-3

Cachero, S., Ostrovsky, AD., Yu, JY., Dickson, BJ., Jefferis, GS. (2010) Sexual dimorphism in the fly brain. Curr Biol. 20(18):1589-601

Csiszar, A., Vogelsang, E., Beug, H., Leptin, M. (2010) A novel conserved phosphotyrosine motif in the Drosophila fibroblast growth factor signaling adaptor Dof with a redundant role in signal transmission. Mol Cell Biol. 30(8):2017-27

Dickson, BJ., Zou, Y. (2010) Navigating intermediate targets: the nervous system midline. Cold Spring Harb Perspect Biol. 2(8):a002055

El-Kasaby, A., Just, H., Malle, E., Stolt-Bergner, PC., Sitte, HH., Freissmuth, M., Kudlacek, O. (2010) Mutations in the carboxyl-terminal SEC24 binding motif of the serotonin transporter impair folding of the transporter. J Biol Chem. 285(50):39201-10

Elsayad, K., Heinze, KG. (2010) Multifrequency parallelized near-field optical imaging with anistropic metal-dielectric stacks Physical Review A. 81(5)

Elsayad, K., Heinze, KG. (2010) Temperature dependence of the near-field superlensing effect for single metal layers and stacked metal-dielectric films Proc. SPIE. 7757:77573L

Elsayad, K., Urich, A., Unterrainer, K., Heinze, KG. (2010) Fast near-field imaging of spectrally broad sources using layered metallic structures Proc. SPIE. 7757:77573M

Eskeland, R., Leeb, M., Grimes, GR., Kress, C., Boyle, S., Sproul, D., Gilbert, N., Fan, Y., Skoultchi, AI., Wutz, A., Bickmore, WA. (2010) Ring1B compacts chromatin structure and represses gene expression independent of histone ubiquitination. Mol Cell. 38(3):452-64

Feng, W., Yonezawa, M., Ye, J., Jenuwein, T., Grummt, I. (2010) PHF8 activates transcription of rRNA genes through H3K4me3 binding and H3K9me1/2 demethylation. Nat Struct Mol Biol. 17(4):445-50

Friedbichler, K., Kerenyi, MA., Kovacic, B., Li, G., Hoelbl, A., Yahiaoui, S., Sexl, V., Müllner, EW., Fajmann, S., Cerny-Reiterer, S., Valent, P., Beug, H., Gouilleux, F., Bunting, KD., Moriggl, R. (2010) Stat5a serine 725 and 779 phosphorylation is a prerequisite for hematopoietic transformation. Blood. 116(9):1548-58

Fuchs, A., Inthal, A., Herrmann, D., Cheng, S., Nakatomi, M., Peters, H., Neubüser, A. (2010) Regulation of Tbx22 during facial and palatal development. Dev Dyn. 239(11):2860-74

Fujimori, S., Novak, H., Weissenböck, M., Jussila, M., Gonçalves, A., Zeller, R., Galloway, J., Thesleff, I., Hartmann, C. (2010) Wnt/β-catenin signaling in the dental mesenchyme regulates incisor development by regulating Bmp4. Dev Biol. 348(1):97-106

Galkin, VE., Schmied, WH., Schraidt, O., Marlovits, TC., Egelman, EH. (2010) The structure of the Salmonella typhimurium type III secretion system needle shows divergence from the flagellar system. J Mol Biol. 396(5):1392-7

Gin, E., Tanaka, EM., Brusch, L. (2010) A model for cyst lumen expansion and size regulation via fluid secretion. J Theor Biol. 264(3):1077-88

Grausenburger, R., Bilic, I., Boucheron, N., Zupkovitz, G., El-Housseiny, L., Tschismarov, R., Zhang, Y., Rembold, M., Gaisberger, M., Hartl, A., Epstein, MM., Matthias, P., Seiser, C., Ellmeier, W. (2010) Conditional deletion of histone deacetylase 1 in T cells leads to enhanced airway inflammation and increased Th2 cytokine production. J Immunol. 185(6):3489-97

Haider, S., Wagner, M., Schmid, MC., Sixt, BS., Christian, JG., Häcker, G., Pichler, P., Mechtler, K., Müller, A., Baranyi, C., Toenshoff, ER., Montanaro, J., Horn, M. (2010) Raman microspectroscopy reveals long-term extracellular activity of Chlamydiae. Mol Microbiol. 77(3):687-700

Hasenbein, S., Meltzer, M., Hauske, P., Kaiser, M., Huber, R., Clausen, T., Ehrmann, M. (2010) Conversion of a regulatory into a degradative protease. J Mol Biol. 397(4):957-66

Haubner, BJ., Neely, GG., Voelkl, JG., Damilano, F., Kuba, K., Imai, Y., Komnenovic, V., Mayr, A., Pachinger, O., Hirsch, E., Penninger, JM., Metzler, B. (2010) PI3Kgamma protects from myocardial ischemia and reperfusion injury through a kinase-independent pathway. PLoS One. 5(2):e9350

Heinz, E., Pichler, P., Heinz, C., Op den Camp, HJ., Toenshoff, ER., Ammerer, G., Mechtler, K., Wagner, M., Horn, M. (2010) Proteomic analysis of the outer membrane of Protochlamydia amoebophila elementary bodies. Proteomics. 10(24):4363-76

Herrmann, D., Ferrer-Vaquer, A., Lahsnig, C., Firnberg, N., Leibbrandt, A., Neubüser, A. (2010) Expression and regulation of ANTXR1 in the chick embryo. Dev Dyn. 239(2):680-7

Hnisz, D., Majer, O., Frohner, IE., Komnenovic, V., Kuchler, K. (2010) The Set3/Hos2 histone deacetylase complex attenuates cAMP/PKA signaling to regulate morphogenesis and virulence of Candida albicans. PLoS Pathog. 6(5):e1000889

Hoelbl, A., Schuster, C., Kovacic, B., Zhu, B., Wickre, M., Hoelzl, MA., Fajmann, S., Grebien, F., Warsch, W., Stengl, G., Hennighausen, L., Poli, V., Beug, H., Moriggl, R., Sexl, V. (2010) Stat5 is indispensable for the maintenance of bcr/abl-positive leukaemia. EMBO Mol Med. 2(3):98-110

Huang, J., Dorsey, J., Chuikov, S., Pérez-Burgos, L., Zhang, X., Jenuwein, T., Reinberg, D., Berger, SL. (2010) G9a and Glp methylate lysine 373 in the tumor suppressor p53. J Biol Chem. 285(13):9636-41

Huber, MA., Maier, HJ., Alacakaptan, M., Wiedemann, E., Braunger, J., Boehmelt, G., Madwed, JB., Young, ER., Marshall, DR., Pehamberger, H., Wirth, T., Kraut, N., Beug, H. (2010) BI 5700, a Selective Chemical Inhibitor of IκB Kinase 2, Specifically Suppresses Epithelial-Mesenchymal Transition and Metastasis in Mouse Models of Tumor Progression. Genes Cancer. 1(2):101-14

Hutchins, JR., Toyoda, Y., Hegemann, B., Poser, I., Hériché, JK., Sykora, MM., Augsburg, M., Hudecz, O., Buschhorn, BA., Bulkescher, J., Conrad, C., Comartin, D., Schleiffer, A., Sarov, M., Pozniakovsky, A., Slabicki, MM., Schloissnig, S., Steinmacher, I., Leuschner, M., Ssykor, A., Lawo, S., Pelletier, L., Stark, H., Nasmyth, K., Ellenberg, J., Durbin, R., Buchholz, F., Mechtler, K., Hyman, AA., Peters, JM. (2010) Systematic analysis of human protein complexes identifies chromosome segregation proteins. Science. 328(5978):593-9

Ishizaki, K., Suzuki, K., Mito, T., Tanaka, EM., Sato, S. (2010) Morphologic, functional, and occlusal characterization of mandibular lateral displacement malocclusion. Am J Orthod Dentofacial Orthop. 137(4):454.e1-9; discussion 454-5

Johnson, BA., Kahler, DJ., Baban, B., Chandler, PR., Kang, B., Shimoda, M., Koni, PA., Pihkala, J., Vilagos, B., Busslinger, M., Munn, DH., Mellor, AL. (2010) B-lymphoid cells with attributes of dendritic cells regulate T cells via indoleamine 2,3-dioxygenase. Proc Natl Acad Sci U S A. 107(23):10644-8

Karginov, FV., Cheloufi, S., Chong, MM., Stark, A., Smith, AD., Hannon, GJ. (2010) Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases. Mol Cell. 38(6):781-8

Katis, VL., Lipp, JJ., Imre, R., Bogdanova, A., Okaz, E., Habermann, B., Mechtler, K., Nasmyth, K., Zachariae, W. (2010) Rec8 phosphorylation by casein kinase 1 and Cdc7-Dbf4 kinase regulates cohesin cleavage by separase during meiosis. Dev Cell. 18(3):397-409

Keays, DA., Cleak, J., Huang, GJ., Edwards, A., Braun, A., Treiber, CD., Pidsley, R., Flint, J. (2010) The role of Tuba1a in adult hippocampal neurogenesis and the formation of the dentate gyrus. Dev Neurosci. 32(4):268-77

Khan, AG., Pickl-Herk, A., Gajdzik, L., Marlovits, TC., Fuchs, R., Blaas, D. (2010) Human rhinovirus 14 enters rhabdomyosarcoma cells expressing icam-1 by a clathrin-, caveolin-, and flotillin-independent pathway. J Virol. 84(8):3984-92

Kim, YJ., Bartalska, K., Audsley, N., Yamanaka, N., Yapici, N., Lee, JY., Kim, YC., Markovic, M., Isaac, E., Tanaka, Y., Dickson, BJ. (2010) MIPs are ancestral ligands for the sex peptide receptor. Proc Natl Acad Sci U S A. 107(14):6520-5

Krojer, T., Sawa, J., Huber, R., Clausen, T. (2010) HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues. Nat Struct Mol Biol. 17(7):844-52

Kuçi, S., Kuçi, Z., Kreyenberg, H., Deak, E., Pütsch, K., Huenecke, S., Amara, C., Koller, S., Rettinger, E., Grez, M., Koehl, U., Latifi-Pupovci, H., Henschler, R., Tonn, T., von Laer, D., Klingebiel, T., Bader, P. (2010) CD271 antigen defines a subset of multipotent stromal cells with immunosuppressive and lymphohematopoietic engraftment-promoting properties. Haematologica. 95(4):651-9

Lampert, F., Hornung, P., Westermann, S. (2010) The Dam1 complex confers microtubule plus end-tracking activity to the Ndc80 kinetochore complex. J Cell Biol. 189(4):641-9

Leeb, M., Pasini, D., Novatchkova, M., Jaritz, M., Helin, K., Wutz, A. (2010) Polycomb complexes act redundantly to repress genomic repeats and genes. Genes Dev. 24(3):265-76

Leeb, M., Wutz, A. (2010) Mechanistic concepts in X inactivation underlying dosage compensation in mammals. Heredity (Edinb). 105(1):64-70

Leitner, A., Sturm, M., Hudecz, O., Mazanek, M., Smått, JH., Lindén, M., Lindner, W., Mechtler, K. (2010) Probing the phosphoproteome of HeLa cells using nanocast metal oxide microspheres for phosphopeptide enrichment. Anal Chem. 82(7):2726-33

Lukaszewicz, A., Howard-Till, RA., Novatchkova, M., Mochizuki, K., Loidl, J. (2010) MRE11 and COM1/SAE2 are required for double-strand break repair and efficient chromosome pairing during meiosis of the protist Tetrahymena. Chromosoma. 119(5):505-18

Lyashenko, N., Weissenböck, M., Sharir, A., Erben, RG., Minami, Y., Hartmann, C. (2010) Mice lacking the orphan receptor ror1 have distinct skeletal abnormalities and are growth retarded. Dev Dyn. 239(8):2266-77

Mach-Aigner, AR., Grosstessner-Hain, K., Poças-Fonseca, MJ., Mechtler, K., Mach, RL. (2010) From an electrophoretic mobility shift assay to isolated transcription factors: a fast genomic-proteomic approach. BMC Genomics. 11:644

Maier HJ., Wirth T., Beug H. (2010) Epithelial-Mesenchymal Transition in Pancreatic Carcinoma Cancers . 2(4):2058-2083

Maier, HJ., Schmidt-Strassburger, U., Huber, MA., Wiedemann, EM., Beug, H., Wirth, T. (2010) NF-kappaB promotes epithelial-mesenchymal transition, migration and invasion of pancreatic carcinoma cells. Cancer Lett. 295(2):214-28

Majewski, IJ., Ritchie, ME., Phipson, B., Corbin, J., Pakusch, M., Ebert, A., Busslinger, M., Koseki, H., Hu, Y., Smyth, GK., Alexander, WS., Hilton, DJ., Blewitt, ME. (2010) Opposing roles of polycomb repressive complexes in hematopoietic stem and progenitor cells. Blood. 116(5):731-9

Malin, S., McManus, S., Busslinger, M. (2010) STAT5 in B cell development and leukemia. Curr Opin Immunol. 22(2):168-76

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