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2006
 
Abzhanov, A., Kuo, WP., Hartmann, C., Grant, BR., Grant, PR., Tabin, CJ. (2006). The calmodulin pathway and evolution of elongated beak morphology in Darwin\'s finches. Nature. 442(7102):563-7 (abstract)
 
Allis, D., Jenuwein, T., Reinberg, D. (Editors), assisted by Caparros, M.L. (2006). Epigenetics Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York..
 
Beard, C., Hochedlinger, K., Plath, K., Wutz, A., Jaenisch, R. (2006). Efficient method to generate single-copy transgenic mice by site-specific integration in embryonic stem cells. Genesis. 44(1):23-8 (abstract)
 
Benetka, W., Koranda, M., Eisenhaber, F. (2006). Protein prenylation: an (almost) comprehensive overview on discovery history, enzymology and significance in physiology and disease. Chemical Monthly. 137:1241-1281
 
Benetka, W., Koranda, M., Maurer-Stroh, S., Pittner, F., Eisenhaber, F. (2006). Farnesylation or geranylgeranylation? Efficient assays for testing protein prenylation in vitro and in vivo. BMC Biochem. 7:6 (abstract)
 
Berdnik, D., Chihara, T., Couto, A., Luo, L. (2006). Wiring stability of the adult Drosophila olfactory circuit after lesion. J Neurosci. 26(13):3367-76 (abstract)
 
Betschinger, J., Mechtler, K., Knoblich, JA. (2006). Asymmetric segregation of the tumor suppressor brat regulates self-renewal in Drosophila neural stem cells. Cell. 124(6):1241-53 (abstract)
 
Bowman, SK., Neumüller, RA., Novatchkova, M., Du, Q., Knoblich, JA. (2006). The Drosophila NuMA Homolog Mud regulates spindle orientation in asymmetric cell division. Dev Cell. 10(6):731-42 (abstract)
 
Bradley, SP., Kaminski, DA., Peters, AH., Jenuwein, T., Stavnezer, J. (2006). The histone methyltransferase Suv39h1 increases class switch recombination specifically to IgA. J Immunol. 177(2):1179-88 (abstract)
 
Brankatschk, M., Dickson, BJ. (2006). Netrins guide Drosophila commissural axons at short range. Nat Neurosci. 9(2):188-94 (abstract)
 
Breithaupt, C., Kurzbauer, R., Lilie, H., Schaller, A., Strassner, J., Huber, R., Macheroux, P., Clausen, T. (2006). Crystal structure of 12-oxophytodienoate reductase 3 from tomato: self-inhibition by dimerization. Proc Natl Acad Sci U S A. 103(39):14337-42 (abstract)
 
Brinkman, AB., Roelofsen, T., Pennings, SW., Martens, JH., Jenuwein, T., Stunnenberg, HG. (2006). Histone modification patterns associated with the human X chromosome. EMBO Rep. 7(6):628-34 (abstract)
 
Buschhorn, BA., Peters, JM. (2006). How APC/C orders destruction. Nat Cell Biol. 8(3):209-11 (abstract)
 
Busslinger, M., Tarakhovsky, A. (2006). Epigenetic control of lymphopoiesis. In Epigenetics (Allis, Jenuwein, Reinberg, eds.); Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.. :397-414
 
Chaumeil, J., Le Baccon, P., Wutz, A., Heard, E. (2006). A novel role for Xist RNA in the formation of a repressive nuclear compartment into which genes are recruited when silenced. Genes Dev. 20(16):2223-37 (abstract)
 
Cowan, CR., Hyman, AA. (2006). Cyclin E-Cdk2 temporally regulates centrosome assembly and establishment of polarity in Caenorhabditis elegans embryos. Nat Cell Biol. 8(12):1441-7 (abstract)
 
Delogu, A., Schebesta, A., Sun, Q., Aschenbrenner, K., Perlot, T., Busslinger, M. (2006). Gene repression by Pax5 in B cells is essential for blood cell homeostasis and is reversed in plasma cells. Immunity. 24(3):269-81 (abstract)
 
Dickson, BJ., Gilestro, GF. (2006). Regulation of commissural axon pathfinding by slit and its Robo receptors. Annu Rev Cell Dev Biol. 22:651-75 (abstract)
 
Dolznig, H., Grebien, F., Deiner, EM., Stangl, K., Kolbus, A., Habermann, B., Kerenyi, MA., Kieslinger, M., Moriggl, R., Beug, H., Müllner, EW. (2006). Erythroid progenitor renewal versus differentiation: genetic evidence for cell autonomous, essential functions of EpoR, Stat5 and the GR. Oncogene. 25(20):2890-900 (abstract)
 
Eisenhaber F. (2006). Biomolecular Mechanisms with Computational Biology
 
Etchegaray, JP., Yang, X., DeBruyne, JP., Peters, AH., Weaver, DR., Jenuwein, T., Reppert, SM. (2006). The polycomb group protein EZH2 is required for mammalian circadian clock function. J Biol Chem. 281(30):21209-15 (abstract)
 
Fodor, BD., Kubicek, S., Yonezawa, M., O\'Sullivan, RJ., Sengupta, R., Perez-Burgos, L., Opravil, S., Mechtler, K., Schotta, G., Jenuwein, T. (2006). Jmjd2b antagonizes H3K9 trimethylation at pericentric heterochromatin in mammalian cells. Genes Dev. 20(12):1557-62 (abstract)
 
Fujimura, Y., Isono, K., Vidal, M., Endoh, M., Kajita, H., Mizutani-Koseki, Y., Takihara, Y., van Lohuizen, M., Otte, A., Jenuwein, T., Deschamps, J., Koseki, H. (2006). Distinct roles of Polycomb group gene products in transcriptionally repressed and active domains of Hoxb8. Development. 133(12):2371-81 (abstract)
 
Gerlich, D., Hirota, T., Koch, B., Peters, JM., Ellenberg, J. (2006). Condensin I stabilizes chromosomes mechanically through a dynamic interaction in live cells. Curr Biol. 16(4):333-44 (abstract)
 
Gerlich, D., Koch, B., Dupeux, F., Peters, JM., Ellenberg, J. (2006). Live-cell imaging reveals a stable cohesin-chromatin interaction after but not before DNA replication. Curr Biol. 16(15):1571-8 (abstract)
 
Gotzmann, J., Fischer, AN., Zojer, M., Mikula, M., Proell, V., Huber, H., Jechlinger, M., Waerner, T., Weith, A., Beug, H., Mikulits, W. (2006). A crucial function of PDGF in TGF-beta-mediated cancer progression of hepatocytes. Oncogene. 25(22):3170-85 (abstract)
 
Grau, S., Richards, PJ., Kerr, B., Hughes, C., Caterson, B., Williams, AS., Junker, U., Jones, SA., Clausen, T., Ehrmann, M. (2006). The role of human HtrA1 in arthritic disease. J Biol Chem. 281(10):6124-9 (abstract)
 
Gregan, J., Rabitsch, PK., Rumpf, C., Novatchkova, M., Schleiffer, A., Nasmyth, K. (2006). High-throughput knockout screen in fission yeast. Nat Protoc. 1(5):2457-64 (abstract)
 
Grote, D., Souabni, A., Busslinger, M., Bouchard, M. (2006). Pax 2/8-regulated Gata 3 expression is necessary for morphogenesis and guidance of the nephric duct in the developing kidney. Development. 133(1):53-61 (abstract)
 
Haemmerle, G., Lass, A., Zimmermann, R., Gorkiewicz, G., Meyer, C., Rozman, J., Heldmaier, G., Maier, R., Theussl, C., Eder, S., Kratky, D., Wagner, EF., Klingenspor, M., Hoefler, G., Zechner, R. (2006). Defective lipolysis and altered energy metabolism in mice lacking adipose triglyceride lipase. Science. 312(5774):734-7 (abstract)
 
Hartmann, C. (2006). Bone and Cartilage. Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine (Ganten, Ruckpaul, eds.). :155-9
 
Hartmann, C. (2006). A Wnt canon orchestrating osteoblastogenesis. Trends Cell Biol. 16(3):151-8 (abstract)
 
Hernandez-Hernandez, A., Ray, P., Litos, G., Ciro, M., Ottolenghi, S., Beug, H., Boyes, J. (2006). Acetylation and MAPK phosphorylation cooperate to regulate the degradation of active GATA-1. EMBO J. 25(14):3264-74 (abstract)
 
Hill, TP., Taketo, MM., Birchmeier, W., Hartmann, C. (2006). Multiple roles of mesenchymal beta-catenin during murine limb patterning. Development. 133(7):1219-29 (abstract)
 
Hoelbl, A., Kovacic, B., Kerenyi, MA., Simma, O., Warsch, W., Cui, Y., Beug, H., Hennighausen, L., Moriggl, R., Sexl, V. (2006). Clarifying the role of Stat5 in lymphoid development and Abelson-induced transformation. Blood. 107(12):4898-906 (abstract)
 
Huang, J., Perez-Burgos, L., Placek, BJ., Sengupta, R., Richter, M., Dorsey, JA., Kubicek, S., Opravil, S., Jenuwein, T., Berger, SL. (2006). Repression of p53 activity by Smyd2-mediated methylation. Nature. 444(7119):629-32 (abstract)
 
Hutterer, A., Berdnik, D., Wirtz-Peitz, F., Zigman, M., Schleiffer, A., Knoblich, JA. (2006). Mitotic activation of the kinase Aurora-A requires its binding partner Bora. Dev Cell. 11(2):147-57 (abstract)
 
Ihling, C., Schmidt, A., Kalkhof, S., Schulz, DM., Stingl, C., Mechtler, K., Haack, M., Beck-Sickinger, AG., Cooper, DM., Sinz, A. (2006). Isotope-labeled cross-linkers and Fourier transform ion cyclotron resonance mass spectrometry for structural analysis of a protein/peptide complex. J Am Soc Mass Spectrom. 17(8):1100-13 (abstract)
 
Janda, E., Nevolo, M., Lehmann, K., Downward, J., Beug, H., Grieco, M. (2006). Raf plus TGFbeta-dependent EMT is initiated by endocytosis and lysosomal degradation of E-cadherin. Oncogene. 25(54):7117-30 (abstract)
 
Jechlinger, M., Sommer, A., Moriggl, R., Seither, P., Kraut, N., Capodiecci, P., Donovan, M., Cordon-Cardo, C., Beug, H., Grünert, S. (2006). Autocrine PDGFR signaling promotes mammary cancer metastasis. J Clin Invest. 116(6):1561-70 (abstract)
 
Jenuwein, T. (2006). The epigenetic magic of histone lysine methylation. FEBS J. 273(14):3121-35 (abstract)
 
Jones, DH., Nakashima, T., Sanchez, OH., Kozieradzki, I., Komarova, SV., Sarosi, I., Morony, S., Rubin, E., Sarao, R., Hojilla, CV., Komnenovic, V., Kong, YY., Schreiber, M., Dixon, SJ., Sims, SM., Khokha, R., Wada, T., Penninger, JM. (2006). Regulation of cancer cell migration and bone metastasis by RANKL. Nature. 440(7084):692-6 (abstract)
 
Kovacic, B., Stoiber, D., Moriggl, R., Weisz, E., Ott, RG., Kreibich, R., Levy, DE., Beug, H., Freissmuth, M., Sexl, V. (2006). STAT1 acts as a tumor promoter for leukemia development. Cancer Cell. 10(1):77-87 (abstract)
 
Kraft, C., Gmachl, M., Peters, JM. (2006). Methods to measure ubiquitin-dependent proteolysis mediated by the anaphase-promoting complex. Methods. 38(1):39-51 (abstract)
 
Kubicek, S., Schotta, G., Lachner, M., Sengupta, R., Kohlmaier, A., Perez-Burgos, L., Linderson, Y., Martens, JH., O\'Sullivan, RJ., Fodor, BD., Yonezawa, M., Peters, AH., Jenuwein, T. (2006). The role of histone modifications in epigenetic transitions during normal and perturbed development. Ernst Schering Res Found Workshop. (57):1-27 (abstract)
 
Kueng, S., Hegemann, B., Peters, BH., Lipp, JJ., Schleiffer, A., Mechtler, K., Peters, JM. (2006). Wapl controls the dynamic association of cohesin with chromatin. Cell. 127(5):955-67 (abstract)
 
Kvitsiani, D., Dickson, BJ. (2006). Shared neural circuitry for female and male sexual behaviours in Drosophila. Curr Biol. 16(10):R355-6 (abstract)
 
Kyewski, B., Klein, L. (2006). A central role for central tolerance. Annu Rev Immunol. 24:571-606 (abstract)
 
Lénárt, P., Peters, JM. (2006). Checkpoint activation: don\'t get mad too much. Curr Biol. 16(11):R412-4 (abstract)
 
Marlovits, TC., Kubori, T., Lara-Tejero, M., Thomas, D., Unger, VM., Galán, JE. (2006). Assembly of the inner rod determines needle length in the type III secretion injectisome. Nature. 441(7093):637-40 (abstract)
 
McGarvey, KM., Fahrner, JA., Greene, E., Martens, J., Jenuwein, T., Baylin, SB. (2006). Silenced tumor suppressor genes reactivated by DNA demethylation do not return to a fully euchromatic chromatin state. Cancer Res. 66(7):3541-9 (abstract)
 
Mitulovic, G., Mechtler, K. (2006). HPLC techniques for proteomics analysis--a short overview of latest developments. Brief Funct Genomic Proteomic. 5(4):249-60 (abstract)
 
Morandell, S., Stasyk, T., Grosstessner-Hain, K., Roitinger, E., Mechtler, K., Bonn, GK., Huber, LA. (2006). Phosphoproteomics strategies for the functional analysis of signal transduction. Proteomics. 6(14):4047-56 (abstract)
 
Mujezinovic, N., Raidl, G., Hutchins, JR., Peters, JM., Mechtler, K., Eisenhaber, F. (2006). Cleaning of raw peptide MS/MS spectra: improved protein identification following deconvolution of multiply charged peaks, isotope clusters, and removal of background noise. Proteomics. 6(19):5117-31 (abstract)
 
Novatchkova, M., Schneider, G., Fritz, R., Eisenhaber, F., Schleiffer, A. (2006). DOUTfinder--identification of distant domain outliers using subsignificant sequence similarity. Nucleic Acids Res. 34(Web Server issue):W214-8 (abstract)
 
Obernosterer, G., Leuschner, PJ., Alenius, M., Martinez, J. (2006). Post-transcriptional regulation of microRNA expression. RNA. 12(7):1161-7 (abstract)
 
Peters, JM. (2006). The anaphase promoting complex/cyclosome: a machine designed to destroy. Nat Rev Mol Cell Biol. 7(9):644-56 (abstract)
 
Petronczki, M., Matos, J., Mori, S., Gregan, J., Bogdanova, A., Schwickart, M., Mechtler, K., Shirahige, K., Zachariae, W., Nasmyth, K. (2006). Monopolar attachment of sister kinetochores at meiosis I requires casein kinase 1. Cell. 126(6):1049-64 (abstract)
 
Rangachari, M., Mauermann, N., Marty, RR., Dirnhofer, S., Kurrer, MO., Komnenovic, V., Penninger, JM., Eriksson, U. (2006). T-bet negatively regulates autoimmune myocarditis by suppressing local production of interleukin 17. J Exp Med. 203(8):2009-19 (abstract)
 
Resch, GP., Small, JV., Goldie, KN. (2006). Electron Microscopy of Extracted Cytoskeletons: Negative Staining, Cryoelectron Microscopy and Correlation with Light Microscopy. Cell Biology - A Laboratory Handbook (J. E. Celis, ed.).
 
Riedel, CG., Katis, VL., Katou, Y., Mori, S., Itoh, T., Helmhart, W., Gálová, M., Petronczki, M., Gregan, J., Cetin, B., Mudrak, I., Ogris, E., Mechtler, K., Pelletier, L., Buchholz, F., Shirahige, K., Nasmyth, K. (2006). Protein phosphatase 2A protects centromeric sister chromatid cohesion during meiosis I. Nature. 441(7089):53-61 (abstract)
 
Rubiolo, C., Piazzolla, D., Meissl, K., Beug, H., Huber, JC., Kolbus, A., Baccarini, M. (2006). A balance between Raf-1 and Fas expression sets the pace of erythroid differentiation. Blood. 108(1):152-9 (abstract)
 
Savarese, F., Flahndorfer, K., Jaenisch, R., Busslinger, M., Wutz, A. (2006). Hematopoietic precursor cells transiently reestablish permissiveness for X inactivation. Mol Cell Biol. 26(19):7167-77 (abstract)
 
Schneider, G., Neuberger, G., Wildpaner, M., Tian, S., Berezovsky, I., Eisenhaber, F. (2006). Application of a sensitive collection heuristic for very large protein families: evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases. BMC Bioinformatics. 7:164 (abstract)
 
Schoeftner, S., Sengupta, AK., Kubicek, S., Mechtler, K., Spahn, L., Koseki, H., Jenuwein, T., Wutz, A. (2006). Recruitment of PRC1 function at the initiation of X inactivation independent of PRC2 and silencing. EMBO J. 25(13):3110-22 (abstract)
 
Schranzhofer, M., Schifrer, M., Cabrera, JA., Kopp, S., Chiba, P., Beug, H., Müllner, EW. (2006). Remodeling the regulation of iron metabolism during erythroid differentiation to ensure efficient heme biosynthesis. Blood. 107(10):4159-67 (abstract)
 
Schubert, D., Primavesi, L., Bishopp, A., Roberts, G., Doonan, J., Jenuwein, T., Goodrich, J. (2006). Silencing by plant Polycomb-group genes requires dispersed trimethylation of histone H3 at lysine 27. EMBO J. 25(19):4638-49 (abstract)
 
Shumaker, DK., Dechat, T., Kohlmaier, A., Adam, SA., Bozovsky, MR., Erdos, MR., Eriksson, M., Goldman, AE., Khuon, S., Collins, FS., Jenuwein, T., Goldman, RD. (2006). Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging. Proc Natl Acad Sci U S A. 103(23):8703-8 (abstract)
 
Später, D., Hill, TP., Gruber, M., Hartmann, C. (2006). Role of canonical Wnt-signalling in joint formation. Eur Cell Mater. 12:71-80 (abstract)
 
Später, D., Hill, TP., O\'sullivan, RJ., Gruber, M., Conner, DA., Hartmann, C. (2006). Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis. Development. 133(15):3039-49 (abstract)
 
Steffen, A., Faix, J., Resch, GP., Linkner, J., Wehland, J., Small, JV., Rottner, K., Stradal, TE. (2006). Filopodia formation in the absence of functional WAVE- and Arp2/3-complexes. Mol Biol Cell. 17(6):2581-91 (abstract)
 
Stepniak, E., Ricci, R., Eferl, R., Sumara, G., Sumara, I., Rath, M., Hui, L., Wagner, EF. (2006). c-Jun/AP-1 controls liver regeneration by repressing p53/p21 and p38 MAPK activity. Genes Dev. 20(16):2306-14 (abstract)
 
Stingl, C., Ihling, C., Ammerer, G., Sinz, A., Mechtler, K. (2006). Application of different fragmentation techniques for the analysis of phosphopeptides using a hybrid linear ion trap-FTICR mass spectrometer. Biochim Biophys Acta. 1764(12):1842-52 (abstract)
 
Stolt, PC., Bock, HH. (2006). Modulation of lipoprotein receptor functions by intracellular adaptor proteins. Cell Signal. 18(10):1560-71 (abstract)
 
Surade, S., Klein, M., Stolt-Bergner, PC., Muenke, C., Roy, A., Michel, H. (2006). Comparative analysis and \"expression space\" coverage of the production of prokaryotic membrane proteins for structural genomics. Protein Sci. 15(9):2178-89 (abstract)
 
Tagoh, H., Ingram, R., Wilson, N., Salvagiotto, G., Warren, AJ., Clarke, D., Busslinger, M., Bonifer, C. (2006). The mechanism of repression of the myeloid-specific c-fms gene by Pax5 during B lineage restriction. EMBO J. 25(5):1070-80 (abstract)
 
Vrontou, E., Nilsen, SP., Demir, E., Kravitz, EA., Dickson, BJ. (2006). fruitless regulates aggression and dominance in Drosophila. Nat Neurosci. 9(12):1469-71 (abstract)
 
Waerner, T., Alacakaptan, M., Tamir, I., Oberauer, R., Gal, A., Brabletz, T., Schreiber, M., Jechlinger, M., Beug, H. (2006). ILEI: a cytokine essential for EMT, tumor formation, and late events in metastasis in epithelial cells. Cancer Cell. 10(3):227-39 (abstract)
 
Wagner, B., Natarajan, A., Grünaug, S., Kroismayr, R., Wagner, EF., Sibilia, M. (2006). Neuronal survival depends on EGFR signaling in cortical but not midbrain astrocytes. EMBO J. 25(4):752-62 (abstract)
 
Watrin, E., Peters, JM. (2006). Cohesin and DNA damage repair. Exp Cell Res. 312(14):2687-93 (abstract)
 
Watrin, E., Schleiffer, A., Tanaka, K., Eisenhaber, F., Nasmyth, K., Peters, JM. (2006). Human Scc4 is required for cohesin binding to chromatin, sister-chromatid cohesion, and mitotic progression. Curr Biol. 16(9):863-74 (abstract)
 
Weisheit, G., Gliem, M., Endl, E., Pfeffer, PL., Busslinger, M., Schilling, K. (2006). Postnatal development of the murine cerebellar cortex: formation and early dispersal of basket, stellate and Golgi neurons. Eur J Neurosci. 24(2):466-78 (abstract)
 
Westermann, S., Wang, HW., Avila-Sakar, A., Drubin, DG., Nogales, E., Barnes, G. (2006). The Dam1 kinetochore ring complex moves processively on depolymerizing microtubule ends. Nature. 440(7083):565-9 (abstract)
 
Wirth, KG., Wutz, G., Kudo, NR., Desdouets, C., Zetterberg, A., Taghybeeglu, S., Seznec, J., Ducos, GM., Ricci, R., Firnberg, N., Peters, JM., Nasmyth, K. (2006). Separase: a universal trigger for sister chromatid disjunction but not chromosome cycle progression. J Cell Biol. 172(6):847-60 (abstract)
 
Yu, JY., Dickson, BJ. (2006). Sexual behaviour: do a few dead neurons make the difference? Curr Biol. 16(1):R23-5 (abstract)
 
Zenz, R., Wagner, EF. (2006). Jun signalling in the epidermis: From developmental defects to psoriasis and skin tumors. Int J Biochem Cell Biol. 38(7):1043-9 (abstract)
 
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